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  <titleInfo>
    <title>Genome-wide mapping of Arabidopsis thaliana origins of DNA replication and their associated epigenetic marks</title>
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  <name type="personal">
    <namePart>Costas, C.</namePart>
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  <name type="personal">
    <namePart>Sanchez, M.</namePart>
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  <name type="personal">
    <namePart>Stroud, H.</namePart>
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  <name type="personal">
    <namePart>Yu, Y.</namePart>
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  <name type="personal">
    <namePart>Oliveros, J.C.</namePart>
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  <name type="personal">
    <namePart>Feng, S.</namePart>
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  <name type="personal">
    <namePart>Benguria, A.</namePart>
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  <name type="personal">
    <namePart>Benguria, A.</namePart>
  </name>
  <name type="personal">
    <namePart>Zhang, X.</namePart>
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  <name type="personal">
    <namePart>Solano, R.</namePart>
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  <name type="personal">
    <namePart>Jacobsen, S.E.</namePart>
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  <name type="personal">
    <namePart>Gutierrez, C.</namePart>
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  <abstract>Genome integrity requires faithful chromosome duplication. Origins of replication, the genomic sites at which DNA replication initiates, are scattered throughout the genome. Their mapping at a genomic scale in multicellular organisms has been challenging. In this study we profiled origins in Arabidopsis thaliana by high-throughput sequencing of newly synthesized DNA and identified ~1,500 putative origins genome-wide. This was supported by chromatin immunoprecipitation and microarray (ChIP-chip)experiments to identify ORC1- and CDC6-binding sites. We validated origin activity independently by measuring the abundance of nascent DNA strands. The midpoints of most A. thaliana origin regions are preferentially located within the 5_O half of genes, enriched in G+C, histone H2A.Z, H3K4me2, H3K4me3 and H4K5ac, and depleted in H3K4me1 1 and H3K9me2. Our data help clarify the epigenetic specification of DNA replication origins in A. thaliana and have implications for other eukaryotes.</abstract>
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    <titleInfo>
      <title>Nature Structural &amp; Molecular Biology, 18, p.395-400, 2011</title>
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  <identifier type="uri">https://drive.google.com/file/d/1J7YDYNbMLA6RRqUOEeyZkSlkpqYQXSAU/view?usp=drivesdk</identifier>
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